Lecture Notes for "Investigating the Architecture of Proteins"
The lecture note sets are HTML versions of the slides used in the lectures
and tutorials. They are not stand-alone, but intended as a resource to
accompany the lectures and to help you review the lectures. In addition,
the index page of each lecture contains pointers to other Web resources
for each subject and, in some cases, a reference list for further reading
on selected topics. Never-the-less you should still keep lecture notes!
The Nuts and Bolts of UNIX and your Workstation account
Introduction to Protein Structure
The Web and the PDB
RASMOL tutorial in the MGL
Other RASMOL information:
Quick Reference Guide
Rasmol Mouse Button Assignments
RASMOL Manual
Creating Lab reports (a tutorial)
Using the Molecular Modeling Program, SYBYL
Other Sybyl Information:
SYBYL Mouse and Menus
SYBYL Manual On-Line
Atom size, molecular surfaces & volumes
What does the PDB tell us...
What is Molecular Mechanics?
Using Molecular Mechanics
Fundamentals of Molecular Dynamics
Analysis of Molecular Dynamics Results