Investigating the Architecture of Proteins
Course schedule
Bold = lecture, Underline = tutorial, Italics = lab
June 1998
S M Tu W Th F S
14 15 16 17 18 19 20 1st class (UNIX); familiarization; Prot. struct.
21 22 23 24 25 26* 27 Browsing & PDB; Lab reports; examine a protein;
Atom size, etc.; *;
28 29 30 surfaces & exposure; RASMOL to SYBYL
July 1998
S M Tu W Th F S
1* 2 3 4 *; comparison; HOLDIDAY
5 6 7* 8 9 10*11 What PDB teaches; *; structure change with
interactions; *
12 13 14 15 16 17*18 MM fundamentals; SYBYL tutorial; MM refinement;
MM Fundamentals(2); *
19 20 21 22*23 24 25 minimize helix; homology modeling; *; homology;
modeling lab; The Water Problem
26 27*28 29 30 31 MD fundamentals; MD using SYBYL; peptide MD
August 1998
S M Tu W Th F S
1
2 3 4 5* 6 7 8 MD analysis; MD analysis lab; *
Aug 5 is last day of class
* 496h jam session, 399 students don't have class on these days.